|
Presenting Author |
Abstract Title |
Talk/Poster |
|
Acar, Omer |
Exploring the evolution of young gene function through genetic interaction networks |
poster/lightning talk
|
|
Ali, Muhammad |
Uncovering binding specificities of the Merlin and ERM family FERM domains |
poster |
|
Aloy, Patrick |
Extending the small molecule similarity principle to all levels of biology |
talk |
|
AlQuraishi, Mohammed |
A combinatorial grammar underlies protein-protein interactions in metazoa |
talk |
|
Al-Thani, Nayra |
Determining interacting partners of FIKK kinase in the human parasite Toxoplasma gondii using AVA-seq method |
poster/lightning talk |
|
Arunachalam, Vinayagam |
SignNets—Fine tuning gene-gene similarity metrics in biological systems |
poster |
|
Baudot, Anais |
Mining multiplex-heterogeneous networks to study premature aging diseases |
poster/lightning talk |
|
Beltrao, Pedro |
Evolution and functional relevance of eukaryotic protein phosphorylation |
talk |
|
Bhosle, Amrisha N |
Identification of targets and inhibitors for methotrexate-resistant breast cancer from low cost paths in a condition specific interactome |
poster/lightning talk |
|
Billmann, Maximilian |
Genome-wide identification of genetic interactions in human cells using CRISPR/Cas9 |
poster/lightning talk |
|
Blum, Benjamin |
Pathway and network models for proteomic and metabolomic data integration |
poster |
|
Bosdriesz, Evert |
Comparative network reconstruction to identify selective anti-cancer drug combinations |
poster/lightning talk |
|
Boyault, Cyril P |
SRC optogenetics meets network biology—Understanding the network dynamics of phospho-signaling accounting for distinct acto-adhesive phenotypes |
poster/lightning talk |
|
Brun, Christine G |
The role of 3’UTR-protein complexes in the subcellular localisation of multifunctional proteins |
talk |
|
Buphamalai, Pisanu |
Multilayered network framework for biomedical data integration and disease gene discovery |
poster |
|
Carlin, Daniel E |
A fast and flexible framework for network assisted genomic association |
poster/lightning talk |
|
Chapman, Alec |
Correlated transcription modules uncovered by high-precision single-cell transcriptomics |
poster/lightning talk |
|
Colic, Medina |
Synthetic lethal interactions and tumor suppressor genes (TSG) as drug suppressors found in CRISPR chemogenetic screens |
poster |
|
Commins, Nicoletta A |
Glucose:Galactose ratio is sensed through competitive uptake at hexose transporters in Saccharomyces cerevisiae |
poster |
|
Coruzzi, Gloria |
The 4th dimension of gene regulatory networks—TIME |
talk |
|
Daakour, Sarah |
Synthetic ORFeomes of Prochlorococcus marinus MED4 and NATL1A—A resource for systems-level interrogation of low- and high-light adaptations in cyanobacteria |
poster |
|
Despres, Philippe |
Systematic perturbation of yeast essential genes using base editing |
poster/lightning talk |
|
Diss, Guillaume |
The genetic landscape of protein-protein interaction |
talk |
|
Dozmorov, Mikhail |
A method for comparing molecular coherence of phenotype-associated gene networks |
poster |
|
Dressler, Lisa |
Functional compensation of epigenetic modifiers as targetable cancer vulnerabilities |
poster/lightning talk |
|
Duran Frigola, Miquel |
Formatting biological big data for modern machine learning in drug discovery |
poster/lightning talk |
|
Faria do Valle, Italo |
Study of the molecular determinants of disease progression in U.S. Veterans |
talk |
|
Fernandez Torras, Adria |
Towards a network-driven biological knowledge integration |
poster |
|
Forster, Duncan T |
Building a functional gene hierarchy of the cell |
poster |
|
Giaffar, Hamza |
How does statistical complexity in the environment drive the evolutionary complexification of network structures? |
poster |
|
Goswami, Swagata |
PP2A activation influences cell fate decisions in acute myeloid leukemia |
poster |
|
Gutteridge, Alex |
Benchmarking network propagation methods for disease gene identification |
poster |
|
Hansen, Kasper D |
Co-expression patterns define epigenetic regulators associated with neurological dysfunction |
poster/lightning talk |
|
Hart, Traver G |
Discovering moonlighting proteins from human functional interaction networks |
talk |
|
Heigwer, Florian |
Time-resolved mapping of genetic interactions to model rewiring of signaling pathways |
talk |
|
Hoang, Danh-Tai |
Data-driven inference of hidden nodes in networks |
talk |
|
Huttenhower, Curtis |
Human, microbial, and molecular interactions in the microbiome |
talk |
|
Jarosz, Dan F |
Epigenetics beyond the chromosome—Heritable network rewiring by intrinsically disordered proteins |
talk |
|
Jensen, Lars J |
STRING—Cross-species integration of data and text |
talk |
|
Johnson, Margaret E |
Stoichiometric balance of protein copy numbers in large reversible protein interaction networks |
poster/lightning talk |
|
Khalil, Ahmad |
Cooperativity and the design of complex regulatory function in synthetic circuits |
talk |
|
Kim, Eiru |
Differential coessentiality reveals dynamics of biological interactions |
poster |
|
Kinney, Justin B |
Measuring cis-regulatory energetics in living cells using allelic manifolds |
talk |
|
Kovacs, Istvan |
Inferring functional interactions in biology |
talk |
|
Kovary, Kyle M |
Identifying therapeutic targets to restore insulin sensitivity in adipose tissue through network analysis |
poster |
|
Kumar, Vivek |
Multi-omics data driven systems biology using using open, extensible and scalable KBase cyber-infrastructure |
poster |
|
Landry, Christian R
Lawton, Matthew |
Molecular pleiotropy contributes to the retention of heteromers of paralogs and slows down their functional divergence
Phosphoproteomic profiling of CAR T-sell signaling
|
talk
poster |
|
Lee, Robin E.C. |
A dynamic stimulation system to reveal the capabilities of signaling networks in single cells |
talk |
|
Lenoir, Walter F |
Identifying tumor suppressor modules through genetic fitness screening data |
poster |
|
Lin, Chung-Wen |
Scoring protein-protein interactions within robust network |
poster |
|
Liu, Renming |
Supervised machine learning with node embeddings provide fast and accurate network-based gene classification |
poster |
|
Lorent, Julie |
Estrogen receptor alpha controls gene expression via translational offsetting |
talk |
|
Ma, Cynthia Z |
Transcription factor activity inference using a network model |
poster |
|
Mancuso, Christopher A |
Network-guided geneset analysis of genomic data with node embeddings |
poster |
|
Mehta, Tarang K |
Evolution of regulatory networks controlling adaptive traits in cichlids |
talk |
|
Morgun, Andrey |
Transkingdom networks as a tool to uncover host-microbiota interactions |
talk |
|
Morohashi, Kengo |
Trichome distribution pattern on Arabidopsis leaf reveals gene expression variations associated with environmental adaptation |
poster |
|
Myers, Chad L |
Mapping functional networks in human cells through genome-wide analysis of genetic interactions |
talk |
|
Noyes, Marcus B |
A synthetic screen of adjacent Cys2His2 zinc fingers uncovers multiple codes of specificity dependent on the geometry of engagement with the DNA |
poster/lightning talk |
|
Oertlin, Christian |
Generally applicable transcriptome-wide analysis of translation using anota2seq |
poster |
|
Oeztuerk, Merve |
Investigation of the regulatory network of fission yeast upon genetic perturbations |
talk |
|
Oliva, Baldo |
Prediction of transcription factor binding by means of structural modeling |
poster |
|
Ooi, Lezanne |
Networks in differentiation identifies selective vulnerability of pluripotent stem cells and motor neurons to ubiquitin proteasome system stress |
talk |
|
Overton, Ian M |
Functionally coherent transcription factor target networks illuminate control of epithelial remodelling and oncogenic Notch |
poster/lightning talk |
|
Pei, Fen |
Quantitative systems pharmacological analysis of drugs of abuse reveals the pleiotropy of targets and the effector role of mTORC1 |
poster |
|
Periwal, Vipul |
Expectation reflection for inferring networks of residue interactions from protein sequence alignments |
poster/lightning talk |
|
Poh, Jonathan |
Experimental investigation of the human Nrf2 protein interaction network |
talk |
|
Pons, Carles |
Exploring allele specific genetic interactions |
poster |
|
Porras Millan, Pablo |
Capturing variation impact on molecular interactions—Updates on the IMEx Consortium mutations data set |
poster |
|
Przulj, Natasa |
Mining the integrated connectedness of biomedical systems |
talk |
|
Przytycka, Teresa M |
New methods for the identification of phenotype-associated mutated networks in cancer and applications to drug response and mutational signatures |
poster |
|
Rahman, AHM Mahfuzur |
Computational methods for benchmarking interaction data from human CRISPR screens |
poster |
|
Ramadan, Stephanie A |
Interactome mapping of the pathogen Helicobacter pylori using All-vs-All sequencing (AVA-seq) |
poster/lightning talk |
|
Ricci-Tam, Chiara J |
Dimmer-switch signaling—An anticipation strategy in dynamic environments? |
poster |
|
Safizadeh, Hamid |
Identification of targets of chemical compounds using multi-modal chemical-genetic interaction screens |
poster |
|
Sahni, Nidhi |
Discovery of novel drivers of homologous recombination deficiencies by integrated network analysis |
talk |
|
Sonawane, Abhijeet R |
Cell-specific gene regulatory networks using epigenetic data |
poster |
|
Srinivasan, Sanjana |
Developing a network anchored functional genomics approach to identify underlying oncogenic vulnerabilities and characterize models of pancreatic cancer |
poster |
|
Stelzl, Ulrich |
Protein interaction networks mediate human tyrosine kinase specificity |
talk |
|
Trigg, Shelly |
Seawater temperature-influenced protein network differences in the Pacific oyster (Crassostrea gigas) during larval development |
poster |
|
van Leeuwen, Jolanda |
Systematic analysis of genetic variants that bypass essential genes |
talk |
|
Vyshenska, Dariia |
Inferring a combination of master regulators to control cervical cancer network |
poster |
|
Wang, Daifeng |
Interpretable deep learning modeling embedding gene regulatory network for understanding neuropsychiatric disorders |
talk |
|
Wang, Wen |
Systematic analysis of genetic interactions in Parkinson’s disease reveals interactions with known risk genes |
poster/lightning talk |
|
Watkins, Sarah H |
Identification and preservation of trait and disease associated DNA methylation modules using two large cohorts |
poster |
|
Wittkopp, Patricia J |
Impacts of mutations on regulatory networks |
talk |
|
Wunderlich, Zeba |
Noise in the shadows—Mechanisms of shadow enhancer robustness in the developing Drosophila embryo |
talk |
|
Xu, Duo |
Supervised learning to predict the LoF-tolerant enhancers in a unified human regulatory network |
poster |
|
Yang, Chia-Hung |
Recombination induces a skewed distribution of gene regulatory networks |
poster |
|
Yu, Haiyuan |
Novel algorithm and technology towards a whole-proteome 3D human interactome |
talk |
|
Yu, Jiyang |
NetBID, a data-driven network-based approach, identifies Hippo signaling as a “hidden” driver selectively programming CD8α+ dendritic cell activity |
poster/lightning talk |
|
Yu, Michael |
A Swiss Army knife for hierarchical modeling of biological systems |
poster |
|
Zanzoni, Andreas |
A domain-resolved interaction network between bacterial secreted effectors and human proteins |
poster |