COMPUTATIONAL CELL BIOLOGY
(UK)

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Abstracts are listed alphabetically by presenting author.

Presenting Author

Abstract Title

Talk/Poster

Armitage, J.

Complex bacterial chemosensory pathways—Why no crosstalk?

talk

Athale, C.A.

Patterning of regulatory gradients by reaction diffusion cascades around chromosomes in Xenopus egg-extracts

poster

Barberis, M.

Sic1 can regulate the fundamental events in the budding yeast cell cycle

talk

Berg-Sorensen, K.

Quantitative force spectroscopy for in vivo systems

poster

Bray, D.

What does a living cell know of itself?

keynote

Bruck, J.

Data driven modeling of yeast glycolysis—Linking two timescales in one model?

talk

Burrage, K.

The role of RNA silencing in circadian clock function

poster

Colman Lerner, A.

Signal anticipation in a GPCR pathway—Single cell measurements of scaffold recruitment show rapid does response alignment before receptor binding reaches equilibrium

talk

Corpas, M.J.

ENFIN—Integrative systems biology across Europe

poster

Csikasz-Nagy, A.

Transcriptional-posttranslational feed-forward loops in cell cycle regulation

talk

Cvijovic, M.

Mathematical model of accumulation of damaged proteins and its impact on aging

poster

Di Cara, A.

Squad as a tool for modeling signaling networks

poster

Di Talia, S.

Size control and asymmetric cell fates in Start of the budding yeast cell cycle

talk

Discher, D.

Matrix elasticity directs stem cell lineage—Experiments and computational insights

talk

Donohue, T.

Function and evolution of a bacterial stress response

talk

Dupont, G.

What can we learn from the irregularity of calcium oscillations?

poster

Durmus Tekir, S.

Reconstruction of insulin signaling network

poster

Durmus Tekir, S.

Topological analysis of epidermal growth factor receptors signaling network

poster

Finlayson, M.

Evolution of cellular networks—MEN in multinucleated cells with asynchronous mitoses

poster

Forger, D.B.

Modeling mammalian circadian rhythms

talk

Fuchs, F.

Genome-wide RNA interference approaches and high-content analysis enable dissection of cellular pathways

poster

Gebäck, T.

Multiresolution image analysis and simulation of capillary networks in sprouting angiogenesis

poster

Geiger, B.

The roles the integrin adhesome in sensing and integrating environmental cues

talk

González-Vélez, V.

Stochastic modeling and simulation of presynaptic secretory dynamics

poster

Hong, C.

A mathematical model of N. crassa circadian rhythms provides insights to molecular mechanisms

talk

Horwitz, A.

Actin and a -actinin orchestrate the assembly and maturation of nascent adhesions in a myosin II motor independent manner

talk

Hunding, A.

Possible ancient common principle of cell division—Intrinsic stationary bipolarity in microtubule dynamics akin to mechanism of pole-to-pole waves in prokaryotes

talk

Kapuy, O.

Bistability by protein multiphosphorylation

poster

Karsenti, E.

Self-organization principles and mitotic spindle assembly

keynote

King, E.M.

Regulatory and mechanical pathways controlling sister-kinetochore motion during metaphase

talk

Klipp, E.

Dynamic modeling of yeast cellular stress resposne and the interaction of pathways

talk

Kozlov, K.N.

ProStack—A new platform for image analysis

talk

Krishnan, J.

Modeling the interaction of polarization mechanisms in chemotaxing eukaryotic cells

talk

Lansford, R.

Dynamic visualization of embryogenesis

talk

Levy, S.F.

Network hubs buffer environmental variation

talk

Ludington, W.B.

Systems identification approach to the assembly dynamics of the eukaryotic flagellum

talk

Mendes, P.

Recent developments in COPASI

talk

Moraru, I.I.

Analysis of FRAP experiments using the virtual microscopy framework

poster

Moraru, I.I.

BioNetGen at VCell—Extending biomolecular interactions to account for combinatorial complexity

poster

Moraru, I.I.

Leveraging the BioPAX ontology and modularity in kinetic modeling

talk

Moura, A.P.

Modeling chromosome replication in eukaryotes

talk

Novak, B.

Computational models of the eukaryotic cell cycle

talk

Oates, A.C.

Coupling, noise and the synchrony dynamics of oscillating cells during the segmentation of the vertebrate embryo

talk

Park, J.

Determination of the inter-mitochondrial messenger molecules by distribution pattern of mitochondria

talk

Priel, A.

Nonlinear cable-like properties of microtubules

poster

Robin, F.B.

A two-step mechanism for invagination during early gastrulation in Ascidians

talk

Rojas, I.

The SABIO-reaction kinetics (SABIO-RK) database

talk

Ruoff, P.

Perfect adaptation and temperature compensation in reaction kinetic networks

talk

Sadot, A.

GemCell—A generic platform for modeling multi-cellular biological systems

poster

Shay, T.

How much DNA can a cell take?

poster

Sřrensen, P.G.

Dynamical quorum sensing in yeast cells

poster

Stefan, M.I.

An allosteric model explains differential activation of PP2B and CaMKII by calmodulin

talk

Svetina, S.

Membrane buds and modeling of cellular processes

talk

Swedlow, J.

The Open Microscopy Environment—Informatics and quantitative analysis for biological microscopy

talk

Thul, R.

How geometry shapes calcium signals in atrial myocytes

poster

Tkacik, G.

Information flow and optimization in transcriptional regulation

talk

Turcotte, M.G.

A hypothesis-driven computational approach to the elucidation of signaling pathway interactions in mammalian cells

talk

Ueda, H.R.

Systems biology of mammalian clocks

talk

Yamada, R.G.

Quantitative perturbations and measurements by MEMS technology

poster

Zamir, E.

Adding proteome dimensions to microscopy—Multicolor compositional imaging

poster

 

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