WORKSHOP
ON CEREAL GENOMICS
September 13
- 19, 2005
Application Deadline: May 15, 2005
Workshop
Instructors:
Sarah
Hake, USDA/UC Berkeley Plant Gene Expression Center
David Jackson, Lincoln Stein & Doreen Ware
Cold Spring Harbor Laboratory
This
one-week workshop on Cereal Genomics will enable participants
to take advantage of emerging genetic tools and genomics
data in the cereals, including the complete genome sequence
of rice and extensive EST and genome survey sequence from
maize, wheat and other grasses. The workshop will feature
morning and evening lectures with afternoon computer lab
exercises. The workshop will also provide hands-on lab work
in the comparative anatomy, phenotype and QTL sections in
which participants will examine samples and make measurements
for statistical analysis to illustrate the power of maize
genetics and its relation to genomics. The faculty (instructors
and lecturers) are active researchers in cereal genetics
and genomics who have made significant contributions to
the field, ensuring that the latest techniques and ideas
will be presented. The course will be structured to provide
time for informal discussions and exchange with leaders
in the field. Students from academic institutions are eligible
to apply for partial scholarships.
Topics:
The rice genome and its annotation;
Genetic mapping: linking physical and genetic maps;
Classical maize genetics and tools;
Comparative anatomy of the cereals;
Comparative genomics;
The maize genome - organization &"partial"
sequence;
Cereals databases;
Quantitative trait locus mapping, association analysis and
evolution;
Genome wide expression analysis- ESTs, microarrays and MPSS.
In
addition to the instructors listed above, the following
speakers have been confirmed: Jeff
Bennetzen, Ed Buckler, Robin Buell, Katrien Devos,
Toby Kellogg, Lisa Harper, Blake Myers, Torbert Rocheford,
Bob Schmidt, Trent Siegfried, Virginia Walbot, Cliff Weil
and Sue Wessler.
The
workshop will be held at the Laboratory's newly opened Genome
Research Center at Woodbury located south of the main Laboratory
campus. Each student will be provided with a wireless PC
laptop for the duration of the course. Lunch and coffee
breaks will be provided at the Genome Research Center, while
housing and dinner will be provided at the main laboratory.
Evening sessions will be held in the Delbruck Laboratory
on the main campus.
This
workshop is supported with funds provided by the National
Science Foundation
Cost
(including board and lodging): $1855*
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*Students
from academic institutions are eligible to apply for partial
scholarships.